How a biochemist leveraged Measurement Tools in XR to Streamline Protein Design

Protein design is a meticulous and intricate process, often hinging on precise measurements and visualizations. For Joe Laureanti, PhD, a biochemist deeply experienced in protein engineering, the journey from traditional computational tools to immersive XR (AR/VR/MR) solutions highlights the transformative impact of intuitive technology.

The Challenge of 2D Protein Visualization

Early in his research career, Joe faced significant hurdles visualizing proteins with his team. He recounted a particularly challenging scenario at a lab meeting:

“I was trying to show an image of a protein binding site that included measured distances critical for our project. But my 2D representation led to confusion—one line looked longer but was actually shorter. It sparked a 30-minute debate among PhDs about whether the measurements could be trusted.”

This incident was more than just a frustrating meeting; it encapsulated a core problem scientists frequently encounter—accurately conveying 3D structural data in a flat 2D interface.

The Shift to Virtual Reality

Discovering Spatial Computing (AR/VR/MR) completely changed Joe’s research experience. “I realized if we could just all stand inside the molecule, nobody would argue about distances,” he explained. Joe began exploring XR tools like UnityMol and later, Nanome.

The Breakthrough: Nanome V2’s Measurement Tool

With Nanome v2, Joe re-experienced a fundamental shift. The new 3D Measurement Tool provided an intuitive and precise method to select atoms and measure distances instantly:

“In version 2 of Nanome, it’s literally just touch and click—you touch an atom, click, touch another, click again, you instantly have your distance. No more struggling with angles on a flat screen.”

Immediate and Tangible Results

Nanome V2’s Measurement Tool dramatically accelerates research workflows. For Joe, the impact was clear:

Time Efficiency: Eliminating the (sometimes) week-long waits for computational chemists to return measurements. Anyone can now perform instant, real-time measurements in collaboration meetings.
Enhanced Accuracy: By interacting directly with proteins in immersive 3D space, teams can ensure more precise and confident decisions, avoiding costly misunderstandings.
Improved Collaboration: Teams easily share insights directly within the XR environment, streamlining discussions and enhancing mutual understanding.

Joe’s Journey Comes Full Circle

Reflecting on his journey, Joe emphasizes the value XR tools bring to molecular research:

“My protein design projects depended heavily on accurate spatial understanding. XR made that possible. The new Measurement Tool in Nanome V2 enables XR design efforts—an intuitive solution for a long-standing challenge.”

For Joe Laureanti and researchers like him, Nanome V2 isn’t merely an incremental upgrade; it’s an innovative leap forward, redefining how scientists visualize, measure, and collaborate in the molecular world.

Enjoyed this blog? For a deeper dive into Joe's fascinating journey, the groundbreaking v2.2 updates, and a wealth of additional insights, be sure to check out The Science Metaverse Podcast. Specifically, tune into Episode 53, where Joe himself shares his experiences and the exciting advancements in detail.

Request a demo today and discover how Nanome v2 can streamline your research, accelerate your discoveries, and unlock new possibilities in biochemistry and beyond.