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Introduction to MARA Freemium

August 14, 2024

An Introduction to MARA Freemium

We're thrilled to announce the public beta launch of MARA, a groundbreaking scientific informatics platform designed to leverage natural language to help you manage and optimize your workflows.

In this blog, we’ll take a deep dive into a few MARA tools currently in place, ready for you to explore and implement in your own projects. Whether you're looking to streamline your project management, automate repetitive tasks, or enhance team collaboration, MARA has a suite of solutions tailored to meet your needs.

Over the coming weeks, we’ll be rolling out additional blog posts, tips, and best practices to help you make the most of MARA’s capabilities. From setting up your first project to customizing workflows that fit your unique processes.

What’s Included in MARA Public Beta?

50 Free Credits: Each credit gives you access to one of MARA’s powerful tools.
Review & Create Tools: Use your free credits to run a variety of different tools or create up to 10 custom tools.

How to Get Started:

  1. Register: Create an account here.
  2. Explore Tools: Utilize MARA’s state-of-the-art reasoning and planning capabilities for assisting you with data analysis and workflow automation and discover how MARA can streamline your research processes.
  3. Maximize Efficiency: Let MARA automate your repetitive tasks, allowing you to focus on high-impact activities.
  4. Leave Feedback: Help us improve MARA.

Enterprise Integration

Easily connect MARA with your existing tools and internal databases, all while keeping your data secure. Contact our team (hello@nanome.ai) to inquire about an Enterprise deployment.

Tools Available in MARA Public Beta

In this section, we’re excited to showcase some of the tools and features available in the public beta release of MARA. Our goal is to give you a comprehensive overview of the resources at your disposal, helping you to make the most of your experience with MARA from day one.

Download and Visualize a PDB file

This tool will allow you to download a file from public databases, such as the RCSB PDB, PubMed, UniChem, Materials Project, and ChEMBL. Just ask MARA for your molecule of interest and a structure viewer window will open showing the molecular structure.

Create a Data Table with Chemical Properties of the Ligand

You can also ask MARA to generate the chemical properties of a molecule from either a SMILES string search or from a downloaded PDB file. This will create a data table that can be manipulated with natural language.

Show Molecules Similar to this Ligand

Another great tool within MARA is the ability to search for molecules similar to your ligand using natural language. This can be used with previous tools to create a data table of similar ligands.

Change the Color of the Protein in the Structure Viewer Using Natural Language

Using natural language, you can alter the view of a protein within the Structure Viewer window. You can change the color of individual residues or entire chains depending on the structure you are viewing.

Visualize a SMILES String in 2D

MARA offers a powerful feature that lets you draw a molecule and seamlessly convert it into a SMILES string. Once you've created your molecule, you can visualize it in 2D and also retrieve its chemical properties, providing a comprehensive understanding of the structure you’ve designed.

Future Blogs

Stay tuned and keep this space bookmarked! We have an exciting lineup of blog posts on the horizon that will delve into specialized workflows tailored to meet the needs of enterprise professionals across various domains. In the coming weeks, we'll be rolling out additional blog posts specifically designed for bioinformaticians, chem-informaticians, computer-aided drug design (CADD) experts, and structure based drug design (SBDD) practitioners.